Browsing by Author "Abad García, David"
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18S rRNA V9 metabarcoding for diet characterization: a critical evaluation with two sympatric zooplanktivorous fish species
Albaina Vivanco, Aitor; Aguirre Rodrigo, Mikel ; Abad García, David; Santos, María; Estomba Recalde, Miren Andone (Wiley Blackwell, 2016-03)The potential of the 18S rRNA V9 metabarcoding approach for diet assessment was explored using MiSeq paired-end (PE; 2 9 150 bp) technology. To critically evaluate the method's performance with degraded/digested DNA, the ... -
Insights on the Origin of Invasive Copepods colonizing Basque Estuaries; a DNA Barcoding Approach
Albaina Vivanco, Aitor; Uriarte Capetillo, Ibon; Aguirre Escobal, Ana Isabel ; Abad García, David; Iriarte Gabicagogeascoa, María Aranzazu; Villate Guinea, Luis Fernando; Estomba Recalde, Miren Andone (Biomed Central, 2016-07-13)Background: The introduction of NIS to estuaries and coastal embayment is of great concern. Commercial ships’ ballast water discharge and the northwards progression of species due to the ongoing climate change arise as ... -
Metabarcoding analysis of the eukaryotic planktonic communities of the Bilbao estuary
Abad García, David (2018-05-31)El estudio de la biodiversidad de las comunidades de plancton de los estuarios resulta de gran interés debido a que son parte fundamental de las cadenas tróficas acuáticas y a su capacidad de responder relativamente rápido ... -
Response of Horticultural Soil Microbiota to Different Fertilization Practices
Zarraonaindia Martínez, Iratxe ; Simón Martinez de Goñi, Xabier; Liñero Campo, Olaia ; Muñoz Colmenero, Marta; Aguirre Rodrigo, Mikel ; Abad García, David; Baroja Careaga, Igor ; De Diego Rodríguez, Alberto ; Gilbert, Jack A.; Estomba Recalde, Miren Andone (MDPI, 2020-10-06)Environmentally friendly agricultural production necessitates manipulation of microbe–plant interactions, requiring a better understanding of how farming practices influence soil microbiota. We studied the effect of ... -
Unraveling the environmental and anthropogenic drivers of bacterial community changes in the Estuary of Bilbao and its tributaries
Aguirre Rodrigo, Mikel ; Abad García, David; Albaina Vivanco, Aitor; Cralle, Lauren; Goñi-Urriza, María Soledad; Estomba Recalde, Miren Andone ; Zarraonaindia Martínez, Iratxe (Public Library Science, 2017-06-08)In this study, 16S rRNA gene sequencing was used to characterize the changes in taxonomic composition and environmental factors significantly influencing bacterial community structure across an annual cycle in the Estuary ...