High microbiome and metabolome diversification in coexisting sponges with different bio-ecological traits
dc.contributor.author | Mazzella, Valeria | |
dc.contributor.author | Dell’Anno, Antonio | |
dc.contributor.author | Etxebarria Loizate, Nestor | |
dc.contributor.author | González Gaya, Belén | |
dc.contributor.author | Nuzzo, Genoveffa | |
dc.contributor.author | Fontana, Angelo | |
dc.contributor.author | Núñez Pons, Laura | |
dc.date.accessioned | 2024-05-17T17:22:43Z | |
dc.date.available | 2024-05-17T17:22:43Z | |
dc.date.issued | 2024 | |
dc.identifier.citation | Communications Biology 7 : (2024) // Article ID 422 | es_ES |
dc.identifier.issn | 2399-3642 | |
dc.identifier.uri | http://hdl.handle.net/10810/68024 | |
dc.description.abstract | Marine Porifera host diverse microbial communities, which influence host metabolism and fitness. However, functional relationships between sponge microbiomes and metabolic signatures are poorly understood. We integrate microbiome characterization, metabolomics and microbial predicted functions of four coexisting Mediterranean sponges –Petrosia ficiformis, Chondrosia reniformis, Crambe crambe and Chondrilla nucula. Microscopy observations reveal anatomical differences in microbial densities. Microbiomes exhibit strong species-specific trends. C. crambe shares many rare amplicon sequence variants (ASV) with the surrounding seawater. This suggests important inputs of microbial diversity acquired by selective horizontal acquisition. Phylum Cyanobacteria is mainly represented in C. nucula and C. crambe. According to putative functions, the microbiome of P. ficiformis and C. reniformis are functionally heterotrophic, while C. crambe and C. nucula are autotrophic. The four species display distinct metabolic profiles at single compound level. However, at molecular class level they share a “core metabolome”. Concurrently, we find global microbiome-metabolome association when considering all four sponge species. Within each species still, sets of microbe/metabolites are identified driving multi-omics congruence. Our findings suggest that diverse microbial players and metabolic profiles may promote niche diversification, but also, analogous phenotypic patterns of “symbiont evolutionary convergence” in sponge assemblages where holobionts co-exist in the same area. | es_ES |
dc.description.sponsorship | Thanks are due to Mr. Bruno Iacono for his help during the sampling phase of this study. We also thank the technicians from RIMAR microscopy group of the Stazione Zoologica: Franco Iamunno, Rita Graziano and Giampiero Lanzotti. Thanks are due to Dr. Maria Cristina Gambi for sharing important knowledge on the sampling area. We deeply thank Dr. Maria Costantini for her tips and for helping during the sampling and the laboratory activity. Authors deeply thank Mr. Pasquale Vassallo for providing underwater picture 1E. V. Mazzella has been supported by a PhD fellowship co-funded by the Stazione Zoologica Anton Dohrn and Polytechnic University of Marche (PhD course in Life and Environmental Sciences, XXXIII cycle). V. Mazzella was also supported by Assemble Plus transnational acces (Project n° 8437: ‘MetMetMetAOA’: Metabolic Meta-analysis in Metaorganisms adapted to Ocean Acidification) and EMBRIC (European Marine Biological Research Infrastructure Cluster) transnational access – (Project n° 5380, ‘MicroMetOAc’: Microbiome shifts and Metabolic production under Ocean Acidification). Graphical abstract was created with BioRender.com. Map in Fig. S1 was created using the Free and Open Source QGIS. Project was partially funded under the National Recovery and Resilience Plan (NRRP), Mission 4 Component 2 Investment 1.4 - Call for tender No. 3138 of 16 December 2021, rectified by Decree n.3175 of 18 December 2021 of Italian Ministry of University and Research funded by the European Union—NextGenerationEU: Award Number: Project code CN_00000033, Concession Decree No. 1034 of 17 June 2022 adopted by the Italian Ministry of University and Research, CUP C63C22000520001, Project title “National Biodiversity Future Center – NBFC. | es_ES |
dc.language.iso | eng | es_ES |
dc.publisher | Nature | es_ES |
dc.rights | info:eu-repo/semantics/openAccess | es_ES |
dc.rights.uri | http://creativecommons.org/licenses/by/3.0/es/ | * |
dc.title | High microbiome and metabolome diversification in coexisting sponges with different bio-ecological traits | es_ES |
dc.type | info:eu-repo/semantics/article | es_ES |
dc.rights.holder | © The Author(s) 2024. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. | es_ES |
dc.rights.holder | Atribución 3.0 España | * |
dc.relation.publisherversion | https://www.nature.com/articles/s42003-024-06109-5 | es_ES |
dc.identifier.doi | 10.1038/s42003-024-06109-5 | |
dc.departamentoes | Química analítica | es_ES |
dc.departamentoeu | Kimika analitikoa | es_ES |
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